Biography:Katherine Pollard

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Short description: American biotechnologist
Katie Pollard
Born
Katherine Snowden Pollard
Alma materPomona College (BA)
University of California, Berkeley (MS, PhD)
AwardsISCB Fellow (2020)
CZ Biohub Investigator (2017-present)
Scientific career
FieldsEvolutionary genomics
Functional genomics[1]
InstitutionsGladstone Institutes
University of California, San Francisco
University of California, Davis
University of California, Santa Cruz
ThesisComputationally intensive statistical methods for analysis of gene expression data (2003)
Doctoral advisorMark van der Laan[2]
Notable studentsSamantha Riesenfeld
Tony Capra
Website{{{1}}}

Katherine Snowden Pollard is the Director of the Gladstone Institute of Data Science and Biotechnology and a professor at the University of California, San Francisco (UCSF).[1][3][4] She is a Chan Zuckerberg Biohub Investigator.[5] She was awarded Fellowship of the International Society for Computational Biology in 2020 and the American Institute for Medical and Biological Engineering in 2021 for outstanding contributions to computational biology and bioinformatics.[6][7]

Education

Pollard received a B.A. summa cum laude in anthropology and mathematics from Pomona College and an M.S. from the University of California, Berkeley (UC Berkeley). She was awarded a Ph.D. in 2003 from UC Berkeley for research supervised by Mark van der Laan.[8][2]

Career and research

Pollard is a leader in developing statistical models and open-source software for big data, especially in genomics.[9][10] Pollard and her team pioneered the identification and named the fastest-evolving regions of the human genome, known as human accelerated regions (HARs).[11][12] Pollard has also designed methods to study the human microbiome[13][14] and other microbial communities, these studies set the stage for using metagenomics in precision medicine.

Prior to working at UCSF, she held a postdoctoral research position with Sandrine Dudoit at UC Berkeley and worked with David Haussler at UC Santa Cruz.[11]

Honors and awards

References

  1. 1.0 1.1 {{Google Scholar id}} template missing ID and not present in Wikidata.
  2. 2.0 2.1 Katherine Pollard at the Mathematics Genealogy Project
  3. Katherine Pollard publications from Europe PubMed Central
  4. Katherine Pollard publications indexed by the Scopus bibliographic database. (Subscription content?)
  5. "Investigator Competition 2021" (in en-US). https://www.czbiohub.org/investigator-competition-2021/. 
  6. "ISCB Fellows". https://www.iscb.org/iscb-fellows. 
  7. "February 19, 2020: ISCB Congratulates and Introduces the 2020 Class of Fellows!". https://www.iscb.org/iscb-news-items/4250-2020-feb19-iscb-congratulates-2020-class-fellows. 
  8. Pollard, Katherine Snowden (2003). Computationally intensive statistical methods for analysis of gene expression data. berkeley.edu (PhD thesis). University of California, Berkeley. OCLC 937442296. ProQuest 305339168.
  9. The Chimpanzee Sequencing and Analysis Consortium (2005). "Initial sequence of the chimpanzee genome and comparison with the human genome". Nature 437 (7055): 69–87. doi:10.1038/nature04072. ISSN 0028-0836. PMID 16136131. Bibcode2005Natur.437...69.. 
  10. Pollard, K. S.; Hubisz, M. J.; Rosenbloom, K. R.; Siepel, A. (2009). "Detection of nonneutral substitution rates on mammalian phylogenies". Genome Research 20 (1): 110–121. doi:10.1101/gr.097857.109. ISSN 1088-9051. PMID 19858363. 
  11. 11.0 11.1 "Forces shaping the fastest evolving regions in the human genome". PLOS Genetics 2 (10): e168. 2006. doi:10.1371/journal.pgen.0020168. PMID 17040131. 
  12. "The role of GC-biased gene conversion in shaping the fastest evolving regions of the human genome". Molecular Biology and Evolution 29 (3): 1047–57. 2012. doi:10.1093/molbev/msr279. PMID 22075116. 
  13. The Human Microbiome Project Consortium (2012). "Structure, function and diversity of the healthy human microbiome". Nature 486 (7402): 207–214. doi:10.1038/nature11234. ISSN 0028-0836. PMID 22699609. Bibcode2012Natur.486..207T. 
  14. The Human Microbiome Project Consortium (2012). "A framework for human microbiome research". Nature 486 (7402): 215–221. doi:10.1038/nature11209. ISSN 0028-0836. PMID 22699610. Bibcode2012Natur.486..215T. 
  15. Frasure, Hannah (18 November 2022). "Scientist Katie Pollard PO '95 nationally recognized for groundbreaking biology research". The Student Life. https://tsl.news/pomona-alumni-scientist-research/. 

External links