Overview
SCaVis: Scientific Computation and Visualization Environment

See: Description

Packages 
PackageDescription
cern.clhep
A Java port of CLHEP 1.4.0 (C++) - A Class Library for High Energy Physics.
cern.colt
Core base classes; Operations on primitive arrays such as sorting, partitioning and permuting.
cern.colt.bitvector
Bit vectors and bit matrices.
cern.colt.buffer
Fixed sized (non resizable) streaming buffers connected to a target objects to which data is automatically flushed upon buffer overflow.
cern.colt.buffer.tboolean
Fixed sized (non resizable) streaming buffers holding boolean elements connected to a target objects to which data is automatically flushed upon buffer overflow.
cern.colt.buffer.tbyte
Fixed sized (non resizable) streaming buffers holding byte elements connected to a target objects to which data is automatically flushed upon buffer overflow.
cern.colt.buffer.tchar
Fixed sized (non resizable) streaming buffers holding char elements connected to a target objects to which data is automatically flushed upon buffer overflow.
cern.colt.buffer.tdouble
Fixed sized (non resizable) streaming buffers holding double elements connected to a target objects to which data is automatically flushed upon buffer overflow.
cern.colt.buffer.tfloat
Fixed sized (non resizable) streaming buffers holding float elements connected to a target objects to which data is automatically flushed upon buffer overflow.
cern.colt.buffer.tint
Fixed sized (non resizable) streaming buffers holding int elements connected to a target objects to which data is automatically flushed upon buffer overflow.
cern.colt.buffer.tlong
Fixed sized (non resizable) streaming buffers holding long elements connected to a target objects to which data is automatically flushed upon buffer overflow.
cern.colt.buffer.tobject
Fixed sized (non resizable) streaming buffers holding Object elements connected to a target objects to which data is automatically flushed upon buffer overflow.
cern.colt.buffer.tshort
Fixed sized (non resizable) streaming buffers holding short elements connected to a target objects to which data is automatically flushed upon buffer overflow.
cern.colt.function
Core interfaces for functions, comparisons and procedures on objects and primitive data types.
cern.colt.function.tboolean
Core interfaces for functions, comparisons and procedures on boolean data type.
cern.colt.function.tbyte
Core interfaces for functions, comparisons and procedures on byte data type.
cern.colt.function.tchar
Core interfaces for functions, comparisons and procedures on char data type.
cern.colt.function.tdcomplex
Core interfaces for functions, comparisons and procedures on dcomplex data type.
cern.colt.function.tdouble
Core interfaces for functions, comparisons and procedures on double data type.
cern.colt.function.tfcomplex
Core interfaces for functions, comparisons and procedures on fcomplex data type.
cern.colt.function.tfloat
Core interfaces for functions, comparisons and procedures on float data type.
cern.colt.function.tint
Core interfaces for functions, comparisons and procedures on int data type.
cern.colt.function.tlong
Core interfaces for functions, comparisons and procedures on long data type.
cern.colt.function.tobject
Core interfaces for functions, comparisons and procedures on Object data type.
cern.colt.function.tshort
Core interfaces for functions, comparisons and procedures on short data type.
cern.colt.list
Resizable lists holding objects or primitive data types such as int, double, etc.
cern.colt.list.adapter
List adapters that make Colt lists compatible with the JDK 1.2 Collections Framework.
cern.colt.list.tboolean
Resizable list holding elements of boolean data type.
cern.colt.list.tbyte
Resizable list holding elements of byte data type.
cern.colt.list.tchar
Resizable list holding elements of char data type.
cern.colt.list.tdouble
Resizable list holding elements of double data type.
cern.colt.list.tfloat
Resizable list holding elements of float data type.
cern.colt.list.tint
Resizable list holding elements of int data type.
cern.colt.list.tlong
Resizable list holding elements of long data type.
cern.colt.list.tobject
Resizable list holding elements of Object data type.
cern.colt.list.tshort
Resizable list holding elements of short data type.
cern.colt.map
Automatically growing and shrinking maps holding objects or primitive data types such as int, double, etc.
cern.colt.map.tdouble
Automatically growing and shrinking map holding elements of double data type.
cern.colt.map.tfloat
Automatically growing and shrinking map holding elements of float data type.
cern.colt.map.tint
Automatically growing and shrinking map holding elements of int data type.
cern.colt.map.tlong
Automatically growing and shrinking map holding elements of long data type.
cern.colt.map.tobject
Automatically growing and shrinking map holding elements of Object data type.
cern.colt.matrix
Matrix interfaces and factories; efficient and flexible dense and sparse 1, 2, 3-dimensional matrices holding objects or primitive data types such as int, double, etc; Templated, fixed sized (not dynamically resizable); Also known as multi-dimensional arrays or Data Cubes.
cern.colt.matrix.bench
Matrix benchmarks.
cern.colt.matrix.doublealgo
Double matrix algorithms such as print formatting, sorting, partitioning and statistics.
cern.colt.matrix.impl
Matrix implementations; You normally need not look at this package, because all concrete classes implement the abstract interfaces of cern.colt.matrix, without subsetting or supersetting.
cern.colt.matrix.io
I/O operations with matrices and vectors.
cern.colt.matrix.linalg
Linear Algebraic matrix computations operating on DoubleMatrix2D and DoubleMatrix1D.
cern.colt.matrix.objectalgo
Object matrix algorithms such as print formatting, sorting, partitioning and statistics.
cern.colt.matrix.tbit
Bit vectors and bit matrices.
cern.colt.matrix.tdcomplex
Matrix interfaces and factories holding elements of dcomplex data type.
cern.colt.matrix.tdcomplex.algo
Algorithms operating on complex matrices.
cern.colt.matrix.tdcomplex.impl
Efficient and flexible dense and sparse 1, 2 and 3-dimensional matrices holding elements of dcomplex data type.
cern.colt.matrix.tdouble
Matrix interfaces and factories holding elements of double data type.
cern.colt.matrix.tdouble.algo
Linear Algebraic matrix computations operating on DoubleMatrix2D and DoubleMatrix1D.
cern.colt.matrix.tdouble.algo.decomposition
Martrix decompositions.
cern.colt.matrix.tdouble.algo.solver
Iterative solvers BiCG - BiConjugate gradients. BiCGstab - BiConjugate gradients stabilized. CG - Conjugate gradients. CGS - Conjugate gradients squared. Chebyshev - The Chebyshev iteration for symmetrical, positive definite matrices. GMRES - Generalized minimal residual using restart. IR - Iterative refinement (Richardson's method). QMR - Quasi-minimal residual. HyBR - Hybrid Bidiagonalization Regularization. MRNSD - Modified Residual Norm Steepest Descent. CGLS - Conjugate Gradient for Least Squares.
cern.colt.matrix.tdouble.algo.solver.preconditioner
Preconditioners for iterative solvers.
cern.colt.matrix.tdouble.impl
Efficient and flexible dense and sparse 1, 2 and 3-dimensional matrices holding elements of double data type.
cern.colt.matrix.tfcomplex
Matrix interfaces and factories holding elements of fcomplex data type.
cern.colt.matrix.tfcomplex.algo
Algorithms operating on complex matrices.
cern.colt.matrix.tfcomplex.impl
Efficient and flexible dense and sparse 1, 2 and 3-dimensional matrices holding elements of fcomplex data type.
cern.colt.matrix.tfloat
Matrix interfaces and factories holding elements of float data type.
cern.colt.matrix.tfloat.algo
Linear Algebraic matrix computations operating on FloatMatrix2D and FloatMatrix1D.
cern.colt.matrix.tfloat.algo.decomposition
Martrix decompositions.
cern.colt.matrix.tfloat.algo.solver
Iterative solvers BiCG - BiConjugate gradients. BiCGstab - BiConjugate gradients stabilized. CG - Conjugate gradients. CGS - Conjugate gradients squared. Chebyshev - The Chebyshev iteration for symmetrical, positive definite matrices. GMRES - Generalized minimal residual using restart. IR - Iterative refinement (Richardson's method). QMR - Quasi-minimal residual. HyBR - Hybrid Bidiagonalization Regularization. MRNSD - Modified Residual Norm Steepest Descent. CGLS - Conjugate Gradient for Least Squares.
cern.colt.matrix.tfloat.algo.solver.preconditioner
Preconditioners for iterative solvers.
cern.colt.matrix.tfloat.impl
Efficient and flexible dense and sparse 1, 2 and 3-dimensional matrices holding elements of float data type.
cern.colt.matrix.tint
Matrix interfaces and factories holding elements of int data type.
cern.colt.matrix.tint.algo
Algorithms operating on integer matrices.
cern.colt.matrix.tint.impl
Efficient and flexible dense and sparse 1, 2 and 3-dimensional matrices holding elements of int data type.
cern.colt.matrix.tlong
Matrix interfaces and factories holding elements of long data type.
cern.colt.matrix.tlong.algo
Algorithms operating on long integer matrices.
cern.colt.matrix.tlong.impl
Efficient and flexible dense and sparse 1, 2 and 3-dimensional matrices holding elements of long data type.
cern.colt.matrix.tobject
Matrix interfaces and factories holding elements of Object data type.
cern.colt.matrix.tobject.algo
Object matrix algorithms such as print formatting, sorting, partitioning and statistics.
cern.colt.matrix.tobject.impl
Efficient and flexible dense and sparse 1, 2 and 3-dimensional matrices holding elements of Object data type.
cern.hep.aida.bin
Multisets (bags) with efficient statistics operations defined upon; This package requires the Colt distribution.
cern.hep.aida.ref
Reference implementation of the AIDA histogram interfaces.
cern.jet.math
Tools for basic and advanced mathematics: Arithmetics and Algebra, Polynomials and Chebyshev series, Bessel and Airy functions, Function Objects for generic function evaluation, etc.
cern.jet.math.tdcomplex
Tools for basic and advanced mathematics: Arithmetics and Function Objects for generic function evaluation operating on dcomplex data type.
cern.jet.math.tdouble
Tools for basic and advanced mathematics: Arithmetics and Algebra, Polynomials and Chebyshev series, Bessel and Airy functions, Function Objects for generic function evaluation, etc.
cern.jet.math.tfcomplex
Tools for basic and advanced mathematics: Arithmetics and Function Objects for generic function evaluation operating on fcomplex data type.
cern.jet.math.tfloat
Tools for basic and advanced mathematics: Arithmetics and Function Objects for generic function evaluation operating on float data type.
cern.jet.math.tint
Tools for basic and advanced mathematics: Arithmetics and Function Objects for generic function evaluation operating on int data type.
cern.jet.math.tlong
Tools for basic and advanced mathematics: Arithmetics and Function Objects for generic function evaluation operating on long data type.
cern.jet.random
Large variety of probability distributions featuring high performance generation of random numbers, CDF's and PDF's.
cern.jet.random.engine
Engines generating strong uniformly distributed pseudo-random numbers;Needed by all JET probability distributions since they rely on uniform random numbers to generate random numbers from their own distribution.
cern.jet.random.sampling
Samples (picks) random subsets of data sequences.
cern.jet.random.tdouble
Large variety of probability distributions featuring high performance generation of random numbers, CDF's and PDF's.
cern.jet.random.tdouble.engine
Engines generating strong uniformly distributed pseudo-random numbers;Needed by all JET probability distributions since they rely on uniform random numbers to generate random numbers from their own distribution.
cern.jet.random.tdouble.sampling
Samples (picks) random subsets of data sequences.
cern.jet.random.tfloat
Large variety of probability distributions featuring high performance generation of random numbers, CDF's and PDF's.
cern.jet.random.tfloat.engine
Engines generating strong uniformly distributed pseudo-random numbers;Needed by all JET probability distributions since they rely on uniform random numbers to generate random numbers from their own distribution.
cern.jet.random.tfloat.sampling
Samples (picks) random subsets of data sequences.
cern.jet.stat
Tools for basic and advanced statistics: Estimators, Gamma functions, Beta functions, Probabilities, Special integrals, etc.
cern.jet.stat.quantile
Scalable algorithms and data structures to compute approximate quantiles over very large data sequences.
cern.jet.stat.tdouble
Tools for basic and advanced statistics: Estimators, Gamma functions, Beta functions, Probabilities, Special integrals, etc.
cern.jet.stat.tdouble.quantile
Scalable algorithms and data structures to compute approximate quantiles over very large data sequences.
cern.jet.stat.tfloat
Tools for basic and advanced statistics: Estimators, Gamma functions, Beta functions, Probabilities, Special integrals, etc.
cern.jet.stat.tfloat.quantile
Scalable algorithms and data structures to compute approximate quantiles over very large data sequences.
colt.hep.aida
Interfaces for compact, extensible, modular and performant histogramming functionality.
com.csam.dif 
com.cureos.numerics 
com.google.common.annotations
Common annotation types.
com.google.common.base
Basic utility libraries and interfaces.
com.google.common.collect
This package contains generic collection interfaces and implementations, and other utilities for working with collections.
com.google.common.math
Arithmetic functions operating on primitive values and BigInteger instances.
com.google.common.primitives
Static utilities for working with the eight primitive types and void, and value types for treating them as unsigned.
com.joptimizer.functions 
com.joptimizer.optimizers 
com.joptimizer.solvers 
com.joptimizer.util 
com.jstatcom.component
GUI components with general functionality.
com.jstatcom.engine
Abstract implementation of the engine communication as well as the procedure call.
com.jstatcom.engine.gauss
GAUSS communication that uses an installed version of the software.
com.jstatcom.engine.grte
Gauss Runtime Engine / Gauss Engine communication.
com.jstatcom.engine.matlab
New enhanced Matlab communication.
com.jstatcom.engine.mlab
Older Matlab communication.
com.jstatcom.engine.ox
Ox communication.
com.jstatcom.engine.stub
Communication to arbitrary system libraries without JNI wrappers.
com.jstatcom.equation
Components to display equations.
com.jstatcom.io
Input/output related classes as well as data import implementations.
com.jstatcom.model
Data model and Symbol Management systems.
com.jstatcom.model.control
Symbol control system.
com.jstatcom.parser
Various parsers generated by JavaCC.
com.jstatcom.project
Project and settings management systems.
com.jstatcom.table
Special tables for some data types.
com.jstatcom.ts
Components and data types related to time series analysis.
com.jstatcom.util
Utility classes shared by other packages.
com.luckycatlabs.sunrisesunset 
com.luckycatlabs.sunrisesunset.calculator 
com.luckycatlabs.sunrisesunset.dto 
com.mbc.jfin.daycount 
com.mbc.jfin.daycount.impl 
com.mbc.jfin.daycount.impl.calculator 
com.mbc.jfin.holiday 
com.mbc.jfin.holiday.impl 
com.mbc.jfin.holiday.impl.financialcalendar 
com.mbc.jfin.schedule 
com.mbc.jfin.schedule.impl 
com.mbc.jfin.util 
com.mhuss.AstroLib 
com.mhuss.Util 
com.seisw.util.geom 
com.twmacinta.io 
com.twmacinta.util 
com.twmacinta.util.test 
corejava
C-like number formatting that follows printf conventions.
de.congrace.exp4j 
edu.cornell.lassp.houle.RngPack 
edu.emory.mathcs.csparsej.tdouble
Double precision classes.
edu.emory.mathcs.csparsej.tdouble.demo
Demos.
edu.emory.mathcs.csparsej.tfloat
Single precision classes.
edu.emory.mathcs.csparsej.tfloat.demo
Demos.
edu.emory.mathcs.jplasma
JPlasma - Java port of PLASMA.
edu.emory.mathcs.jplasma.benchmark
Benchmarks.
edu.emory.mathcs.jplasma.example
Examples.
edu.emory.mathcs.jplasma.tdouble
Double precision API.
edu.emory.mathcs.jplasma.test
Tests.
edu.emory.mathcs.jtransforms.dct
Discrete Cosine Transforms.
edu.emory.mathcs.jtransforms.dht
Discrete Hartley Transforms.
edu.emory.mathcs.jtransforms.dst
Discrete Sine Transforms.
edu.emory.mathcs.jtransforms.fft
Discrete Fourier Transforms.
edu.emory.mathcs.utils
Utility classes.
edu.jas.application
Groebner base application package.
edu.jas.arith
Basic arithmetic package.
edu.jas.fd
Factorization domain package.
edu.jas.gb
Groebner bases package.
edu.jas.gbmod
Module Groebner base package.
edu.jas.gbufd
Groebner bases using unique factorization package.
edu.jas.integrate
Elementary Integration package.
edu.jas.kern
JAS run-time kernel package.
edu.jas.poly
Generic coefficients polynomial package.
edu.jas.ps
Generic coefficients power series package.
edu.jas.root
Real and Complex Root Computation package.
edu.jas.structure
Basic structural interfaces.
edu.jas.ufd
Unique factorization domain package.
edu.jas.ufdroot
Unique Factorization Domain and Roots package.
edu.jas.util
Concurrent programming utility classes.
edu.jas.vector
Generic vector and matrix package.
edu.mas.kern
Adaptors to MAS classes.
edu.rit.clu.antimatter
Package edu.rit.clu.antimatterprovides the Antimatter Simulation,an example of an N-body problem.
edu.rit.clu.fractal
Package edu.rit.clu.fractal contains sequential and cluster parallel programs for computing images of fractals.
edu.rit.clu.heat
Package edu.rit.clu.heat contains sequential and cluster parallel programs for computing a heat distribution problem.
edu.rit.clu.keysearch
Package edu.rit.clu.keysearch contains sequential and cluster parallel programs for a cryptanalysis problem.
edu.rit.clu.monte
Package edu.rit.clu.monte contains sequential and cluster parallel Monte Carlo programs.
edu.rit.clu.network
Package edu.rit.clu.network contains sequential and cluster parallel programs for network algorithms.
edu.rit.clu.timing
Package edu.rit.clu.timing contains programs for timing various operations on a workstation cluster.
edu.rit.color
Package edu.rit.color contains components for working with colors.
edu.rit.compbio.phyl
Package edu.rit.compbio.phyl contains parallel programs for phylogenetic tree construction.
edu.rit.compbio.phyl.test
Package edu.rit.compbio.phyl.test contains unit test programs for the classes in package edu.rit.compbio.phyl.
edu.rit.compbio.seq
Package edu.rit.compbio.seq contains parallel programs for biological sequence alignment.
edu.rit.compbio.seq.test
Package edu.rit.compbio.seq.test contains unit test programs for the classes in package edu.rit.compbio.seq.
edu.rit.crypto
Package edu.rit.cryptoprovides various cryptographic classes.
edu.rit.crypto.blockcipher
Package edu.rit.crypto.blockcipherprovides classes for block ciphers.
edu.rit.draw
Package edu.rit.drawcontains classes and programs for drawingdiagrams and slides of all kinds.
edu.rit.draw.item
Package edu.rit.draw.itemcontains classes for the different kinds of drawing itemsthat can appear in a Drawing.
edu.rit.draw.item.test
Package edu.rit.draw.itemcontains classes for the different kinds of drawing itemsthat can appear in a Drawing.
edu.rit.http
Package edu.rit.http contains components for working with the Hypertext Transfer Protocol (HTTP).
edu.rit.hyb.antimatter
Package edu.rit.hyb.antimatterprovides the Antimatter Simulation,an example of an N-body problem.
edu.rit.hyb.fractal
Package edu.rit.hyb.fractal contains sequential and hybrid SMP parallel programs for computing images of fractals.
edu.rit.hyb.keysearch
Package edu.rit.hyb.keysearch contains sequential and hybrid SMP cluster parallel programs for a cryptanalysis problem.
edu.rit.hyb.monte
Package edu.rit.hyb.monte contains sequential and hybrid SMP cluster parallel Monte Carlo programs.
edu.rit.hyb.network
Package edu.rit.hyb.network contains sequential and hybrid SMP cluster parallel programs for network algorithms.
edu.rit.hyb.prime
Package edu.rit.hyb.prime contains sequential and hybrid SMP cluster parallel programs for finding prime numbers.
edu.rit.image
Package edu.rit.image contains components for treating matrices as images, where each element of the matrix corresponds to one pixel of the image.
edu.rit.image.test
Package edu.rit.image.test contains unit test programs for package edu.rit.image.
edu.rit.io
Package edu.rit.io contains components for input/output.
edu.rit.mp
Package edu.rit.mp contains the Message Protocol (MP),a transport layer protocolfor sending messages using TCP.
edu.rit.mp.buf
Package edu.rit.mp.buf contains message buffer classesfor sending and receiving messages using the Message Protocol (MP).
edu.rit.mp.test
Package edu.rit.mp contains unit test programs for package edu.rit.mp.
edu.rit.mri
Package edu.rit.mri contains parallel programs for an MRI spin relaxometry analysis problem.
edu.rit.mri.test
Package edu.rit.mri.test contains unit test programs and prototype programs for the MRI spin relaxometry analysis problem in package edu.rit.mri.
edu.rit.numeric
Package edu.rit.numeric contains common classes for numerical computation.
edu.rit.numeric.plot
Package edu.rit.numeric.plotprovides classes and interfaces for plotting data.
edu.rit.numeric.plot.impl
Package edu.rit.numeric.plot.implprovides low-level implementation classesfor the high-level plotting classesin package edu.rit.numeric.plot.
edu.rit.pj
Package edu.rit.pj contains Parallel Java (PJ), an API and middleware for parallel programming in 100% Java on shared memory multiprocessor (SMP) parallel computers, cluster parallel computers, and hybrid SMP cluster parallel computers.
edu.rit.pj.cluster
Package edu.rit.pj.cluster contains client and server programs for message passing parallel programming using Parallel Java (PJ).
edu.rit.pj.cluster.test
Package edu.rit.pj.cluster.test contains unit test programs for package edu.rit.pj.cluster.
edu.rit.pj.io
Package edu.rit.pj.io contains classes for parallel file input and output in Parallel Java (PJ) programs.
edu.rit.pj.job
Package edu.rit.pj.job contains contains programs and classes for running groups of independent jobs on shared memory multiprocessor (SMP) parallel computers, cluster parallel computers, and hybrid SMP cluster parallel computers.
edu.rit.pj.job.test
Package edu.rit.pj.job.test contains unit test classes for package edu.rit.pj.job.
edu.rit.pj.reduction
Package edu.rit.pj.reduction contains classes for parallel reduction.
edu.rit.pj.replica
Package edu.rit.pj.replica contains classes for replicated, shared reduction variables.
edu.rit.pj.test
Package edu.rit.pj.test contains unit test main programs for Parallel Java (PJ) in package edu.rit.pj.
edu.rit.sim
Package edu.rit.sim contains classes for discrete event simulation.
edu.rit.smp.ca
Package edu.rit.smp.ca contains sequential and SMP parallel programs for computing images of cellular automata (CAs).
edu.rit.smp.fractal
Package edu.rit.smp.fractal contains sequential and SMP parallel programs for computing images of fractals.
edu.rit.smp.keysearch
Package edu.rit.smp.keysearch contains sequential and SMP parallel programs for a cryptanalysis problem.
edu.rit.smp.monte
Package edu.rit.smp.monte contains sequential and SMP parallel Monte Carlo programs.
edu.rit.smp.network
Package edu.rit.smp.network contains sequential and SMP parallel programs for network algorithms.
edu.rit.swing
Package edu.rit.swing contains GUI components designed to work with Java Swing.
edu.rit.util
Package edu.rit.util contains general utility components.
edu.rit.vector
Package edu.rit.vector contains classes for mathematical vectors.
edu.stanford.rsl.jpop 
edu.stanford.rsl.jpop.fortran 
edu.stanford.rsl.jpop.testing 
edu.stanford.rsl.jpop.utils 
hep.aida 
hep.aida.dev 
hep.aida.ext 
hep.aida.ref
Reference implementation of AIDA (see documentation).
hep.aida.ref.dataset 
hep.aida.ref.dataset.binner 
hep.aida.ref.event 
hep.aida.ref.fitter 
hep.aida.ref.fitter.fitdata 
hep.aida.ref.fitter.fitmethod 
hep.aida.ref.function 
hep.aida.ref.function.examples 
hep.aida.ref.histogram 
hep.aida.ref.histogram.binner 
hep.aida.ref.jel 
hep.aida.ref.optimizer 
hep.aida.ref.optimizer.fmin 
hep.aida.ref.optimizer.jminuit 
hep.aida.ref.optimizer.minpack 
hep.aida.ref.optimizer.uncmin 
hep.aida.ref.pdf 
hep.aida.ref.pdf.examples 
hep.aida.ref.plotter 
hep.aida.ref.plotter.adapter 
hep.aida.ref.plotter.style.editor 
hep.aida.ref.plotter.style.registry 
hep.aida.ref.tree 
hep.aida.ref.tuple 
hep.aida.ref.xml 
hep.aida.tdouble
Interfaces for compact, extensible, modular and performant histogramming functionality.
hep.aida.tdouble.bin
Multisets (bags) with efficient statistics operations defined upon; This package requires the Colt distribution.
hep.aida.tdouble.ref
Reference implementation of the AIDA histogram interfaces.
hep.aida.tfloat
Interfaces for compact, extensible, modular and performant histogramming functionality.
hep.aida.tfloat.bin
Multisets (bags) with efficient statistics operations defined upon; This package requires the Colt distribution.
hep.aida.tfloat.ref
Reference implementation of the AIDA histogram interfaces.
hep.aida.util 
hep.aida.util.comparison 
hep.physics.event
Basic HEP event classes.
hep.physics.event.generator
Event generator infrastructure
hep.physics.event.generator.diagnostic
Diagnostic event generator
hep.physics.filter
Particle selection utilities.
hep.physics.jet
Jet finding and event shape utilities.
hep.physics.matrix
Simple matrix package.
hep.physics.particle
Simple HEP particle classes.
hep.physics.particle.properties
Simple HEP particle property classes.
hep.physics.stdhep.convert
A package which can be used to convert between StdhepEvents and the much more OO HepEvent representation.
hep.physics.vec
General classes for operating on 3- and 4- vectors.
hephysics
Various Lorentz-type particles and transformationsi for high-energy physics applications.
hephysics.matrix
Simple matrix package.
hephysics.particle
Define various Lorentz-type particles.
hephysics.vec
Lorentz-type vectors and transformations.
ij 
ij.io 
ij.macro 
ij.measure 
ij.plugin 
ij.plugin.filter 
ij.plugin.frame 
ij.process 
ij.text 
ij.util 
Jama 
Jama.examples 
Jama.test 
Jama.util 
Jampack 
javanpst.data 
javanpst.data.distributions.aproximateTable 
javanpst.data.distributions.criticalTable 
javanpst.data.distributions.incompleteTable 
javanpst.data.readers.distributionReaders 
javanpst.data.readers.sequenceReaders 
javanpst.data.readers.tabularDataReaders 
javanpst.data.structures.dataTable 
javanpst.data.structures.sequence 
javanpst.data.writers.sequenceWriters 
javanpst.data.writers.tabularDataWriters 
javanpst.distributions 
javanpst.distributions.common 
javanpst.distributions.common.continuous 
javanpst.distributions.common.discrete 
javanpst.distributions.tests 
javanpst.examples 
javanpst.tests 
javanpst.tests.bivariate.danielTrendTest 
javanpst.tests.bivariate.kendallTest 
javanpst.tests.countData.contingencyCoefficient 
javanpst.tests.countData.fisherTest 
javanpst.tests.countData.mcNemarTest 
javanpst.tests.countData.multinomialEqualityTest 
javanpst.tests.countData.orderedEqualityTest 
javanpst.tests.equality.CDTest 
javanpst.tests.equality.extendedMedianTest 
javanpst.tests.equality.JTTest 
javanpst.tests.equality.kruskalWallisTest 
javanpst.tests.goodness.A_DTest 
javanpst.tests.goodness.chiSquareTest 
javanpst.tests.goodness.K_STest 
javanpst.tests.goodness.lillieforsTest 
javanpst.tests.location.normalScoresTest 
javanpst.tests.location.wilcoxonRankSumTest 
javanpst.tests.multiple.concordanceCoefficient 
javanpst.tests.multiple.friedmanTest 
javanpst.tests.multiple.incompleteConcordance 
javanpst.tests.multiple.pageTest 
javanpst.tests.multiple.partialCorrelationTest 
javanpst.tests.oneSample.confidenceQuantile 
javanpst.tests.oneSample.populationQuantile 
javanpst.tests.oneSample.signTest 
javanpst.tests.oneSample.wilcoxonTest 
javanpst.tests.randomness.numberRunsTest 
javanpst.tests.randomness.runsUpDownMedianTest 
javanpst.tests.randomness.runsUpDownTest 
javanpst.tests.randomness.vonNeumannTest 
javanpst.tests.scale.david_BartonTest 
javanpst.tests.scale.freund_Ansari_BradleyTest 
javanpst.tests.scale.klotzTest 
javanpst.tests.scale.moodTest 
javanpst.tests.scale.siegel_TukeyTest 
javanpst.tests.scale.sukhatmeTest 
javanpst.tests.twoSample.controlMedianTest 
javanpst.tests.twoSample.K_STest 
javanpst.tests.twoSample.medianTest 
javanpst.tests.twoSample.wald_WolfowitzTest 
javanpst.utils 
javax.measure
Provides strongly typed measurements to enforce compile-time check of parameters consistency and avoid interface errors.
javax.measure.converter
Provides support for unit conversion.
javax.measure.quantity
Provides quantitative properties or attributes of thing such as mass, time, distance, heat, and angular separation.
javax.measure.unit
Provides support for programatic unit handling.
jdistlib 
jdistlib.disttest 
jdistlib.evd 
jdistlib.generic 
jdistlib.math 
jdistlib.matrix 
jdistlib.rng 
jdistlib.util 
jhplot
Main SCaVis numerical and graphical package
jhplot.bsom
Bayesian Self-Organizing Maps
jhplot.fit
Predefined fit functions for the fit panel (HFit).
jhplot.gui
Commong GUI components
jhplot.io
jHPlot IO classes
jhplot.io.csv
A very simple CSV parser for Java released under a commercial-friendly license.
jhplot.io.csv.bean
A simple bean binding interface for use with opencsv.
jhplot.io.db 
jhplot.jadraw
Main JaPlot classes for plots and diagrams
jhplot.math
Math calculations and random numbers.
jhplot.math.io
IO package for math (based on jmathtools).
jhplot.math.num
Common classes used throughout numerics4j.
jhplot.math.num.integration
Function interfaces.
jhplot.math.num.pdf
Statistical distributions.
jhplot.math.num.random
Random number generators and random variable generators.
jhplot.math.num.root
Function interfaces.
jhplot.math.num.special
Elementary functions not provided by the Java™.
jhplot.math.pca
A library implementing Principal Component Analysis (PCA) data transformation; in majority of cases the only class that the library's user should be interested in is the class.
jhplot.math.pca.covmatrixevd
A package containing two different implementations of the data's covariance matrix eigenvalue decomposition.
jhplot.math.pca.tests 
jhplot.root
Access to ROOT files (based on Tony Johnson's RootHistogramBrowser).
jhplot.security
MD5 hash for objects or data files
jhplot.shapes
SCaVis package to draw java 2D primitives
jhplot.stat
Statistical calculations: fluctuations, linear regression etc.
jhplot.utils
Useful classes for verious manipulations and integration with SCaVis
jhplot.v3d
Main SCaVis 3D geometry package.
jhpro.engine3d 
jhpro.engine3d.MathParser 
jhpro.engine3d.models 
jhpro.fit
This package used to fit data with shapes (like ellipses)
jhpro.nnet 
jhpro.sregression
Symbolic regression based on JGAP
jhpro.stat 
jhpro.stat.limit 
jhpro.test 
jhpro.tseries 
jminhep.algorithms 
jminhep.clcontrol 
jminhep.cluster
jHepWork package for a cluster analysis.
jminhep.gui 
jminhep.utils 
joptima 
joptima.fortran 
joptima.fortran.linalg 
joptima.functions 
joptima.tests 
jsci
Java Science (JSci) library for different scientific fields (Physics, Math, Biology, Chemistry).
jsci.astro
Java library for astronomy / astrophysics
jsci.biology
Calculations for biology
jsci.chemistry
Java calculations for chemistry
jsci.chemistry.periodictable 
jsci.maths
Java library for mathematics.
jsci.maths.algebras
This package contains the interfaces for modules, vector spaces, and algebras.
jsci.maths.analysis 
jsci.maths.categories 
jsci.maths.chaos
Contains some chaotic maps.
jsci.maths.fields
This package contains the interfaces for rings and fields.
jsci.maths.groups
This package contains the interfaces for semigroups, monoids, and groups.
jsci.maths.matrices
Matrix and Vector classes.
jsci.maths.polynomials 
jsci.maths.symbolic 
jsci.maths.vectors 
jsci.maths.wavelet
Java library for Wavelets.
jsci.maths.wavelet.cdf2_4 
jsci.maths.wavelet.cdf3_5 
jsci.maths.wavelet.daubechies2 
jsci.maths.wavelet.daubechies3 
jsci.maths.wavelet.daubechies4 
jsci.maths.wavelet.daubechies5 
jsci.maths.wavelet.daubechies6 
jsci.maths.wavelet.daubechies7 
jsci.maths.wavelet.daubechies8 
jsci.maths.wavelet.haar
Haar wavelets have compact support and are not continuously differentiable.
jsci.maths.wavelet.splines
Linear splines have infinite support and are continuous.
jsci.maths.wavelet.symmlet8 
jsci.physics
The physics package.
jsci.physics.particles
This package contains classes that represent the fundamental particles.
jsci.physics.quantum
Quantum package.
jsci.physics.relativity
This is based on the index-free notation of differential geometry.
jsci.util 
jyplot 
jyplot.XYErrorBar 
math.geom2d
Planar geometry toolbox.
math.geom2d.circulinear
Definition of circulinear shapes and some implementations.
math.geom2d.circulinear.buffer
Computation of buffer for circulinear shapes.
math.geom2d.conic
Definition of various conic curves like circles, ellipses, parabolas and hyperbolas, and their respective arcs.
math.geom2d.curve
Curves interface hierarchy, and implementations of curve sets and various poly-curves.
math.geom2d.domain
Definition of planar domains, and basic implementations.
math.geom2d.grid
Infinite grids with various geometries (square, triangle).
math.geom2d.line
Implementations of 'linear shapes', i.e.
math.geom2d.point
Data structures for point sets.
math.geom2d.polygon
Definitions and implementations of shapes composed several line segments: polylines, rings, polygons.
math.geom2d.polygon.convhull
Convex hull computation.
math.geom2d.spline
Bezier curves, and more generally polynomial curves.
math.geom2d.transform
Contains interface hierarchy for planar transforms, and implementations for specialized transforms.
math.geom2s
Spherical geometry toolbox.
math.geom3d
Spatial geometry toolbox.
math.geom3d.curve
Spatial geometry toolbox.
math.geom3d.line
Spatial geometry toolbox.
math.geom3d.plane
Spatial geometry toolbox.
math.geom3d.transform
Spatial geometry toolbox.
math.jwave 
math.jwave.datatypes 
math.jwave.exc 
math.jwave.tools 
math.jwave.transforms 
math.jwave.transforms.modes 
math.jwave.transforms.wavelets 
math.utils
Utilitary classes, mainly a Matrix class.
net.java.dev.colorchooser 
org.apache.commons.lang3
Provides highly reusable static utility methods, chiefly concerned with adding value to the java.lang classes.
org.apache.commons.lang3.builder
Assists in creating consistent equals(Object), toString(),hashCode(), and compareTo(Object) methods.
org.apache.commons.lang3.concurrent
Provides support classes for multi-threaded programming.
org.apache.commons.lang3.event
Provides some useful event-based utilities.
org.apache.commons.lang3.exception
Provides functionality for Exceptions.
org.apache.commons.lang3.math
Extends java.math for business mathematical classes.
org.apache.commons.lang3.mutable
Provides typed mutable wrappers to primitive values and Object.
org.apache.commons.lang3.reflect
Accumulates common high-level uses of the java.lang.reflect APIs.
org.apache.commons.lang3.text
Provides classes for handling and manipulating text, partly as an extension to java.text.
org.apache.commons.lang3.text.translate
An API for creating text translation routines from a set of smaller building blocks.
org.apache.commons.lang3.time
Provides classes and methods to work with dates and durations.
org.apache.commons.lang3.tuple
Tuple classes, starting with a Pair class in version 3.0.
org.apache.commons.math3
Common classes used throughout the commons-math library.
org.apache.commons.math3.analysis
Parent package for common numerical analysis procedures, including root finding, function interpolation and integration.
org.apache.commons.math3.analysis.differentiation
This package holds the main interfaces and basic building block classes dealing with differentiation.
org.apache.commons.math3.analysis.function
The function package contains function objects that wrap the methods contained in Math, as well as common mathematical functions such as the gaussian and sinc functions.
org.apache.commons.math3.analysis.integration
Numerical integration (quadrature) algorithms for univariate real functions.
org.apache.commons.math3.analysis.integration.gauss
Gauss family of quadrature schemes.
org.apache.commons.math3.analysis.interpolation
Univariate real functions interpolation algorithms.
org.apache.commons.math3.analysis.polynomials
Univariate real polynomials implementations, seen as differentiable univariate real functions.
org.apache.commons.math3.analysis.solvers
Root finding algorithms, for univariate real functions.
org.apache.commons.math3.complex
Complex number type and implementations of complex transcendental functions.
org.apache.commons.math3.dfp
Decimal floating point library for Java
org.apache.commons.math3.distribution
Implementations of common discrete and continuous distributions.
org.apache.commons.math3.distribution.fitting
Fitting of parameters against distributions.
org.apache.commons.math3.exception
Specialized exceptions for algorithms errors.
org.apache.commons.math3.exception.util
Classes supporting exception localization.
org.apache.commons.math3.filter
Implementations of common discrete-time linear filters.
org.apache.commons.math3.fitting
Classes to perform curve fitting.
org.apache.commons.math3.fitting.leastsquares
This package provides algorithms that minimize the residuals between observations and model values.
org.apache.commons.math3.fraction
Fraction number type and fraction number formatting.
org.apache.commons.math3.genetics
This package provides Genetic Algorithms components and implementations.
org.apache.commons.math3.geometry
This package is the top level package for geometry.
org.apache.commons.math3.geometry.euclidean.oned
This package provides basic 1D geometry components.
org.apache.commons.math3.geometry.euclidean.threed
This package provides basic 3D geometry components.
org.apache.commons.math3.geometry.euclidean.twod
This package provides basic 2D geometry components.
org.apache.commons.math3.geometry.partitioning
This package provides classes to implement Binary Space Partition trees.
org.apache.commons.math3.geometry.partitioning.utilities
This package provides multidimensional ordering features for partitioning.
org.apache.commons.math3.geometry.spherical.oned
This package provides basic geometry components on the 1-sphere.
org.apache.commons.math3.geometry.spherical.twod
This package provides basic geometry components on the 2-sphere.
org.apache.commons.math3.linear
Linear algebra support.
org.apache.commons.math3.ml
Base package for machine learning algorithms.
org.apache.commons.math3.ml.clustering
Clustering algorithms.
org.apache.commons.math3.ml.clustering.evaluation
Cluster evaluation methods.
org.apache.commons.math3.ml.distance
Common distance measures.
org.apache.commons.math3.ode
This package provides classes to solve Ordinary Differential Equations problems.
org.apache.commons.math3.ode.events
This package provides classes to handle discrete events occurring during Ordinary Differential Equations integration.
org.apache.commons.math3.ode.nonstiff
This package provides classes to solve non-stiff Ordinary Differential Equations problems.
org.apache.commons.math3.ode.sampling
This package provides classes to handle sampling steps during Ordinary Differential Equations integration.
org.apache.commons.math3.optim
Generally, optimizers are algorithms that will either minimize or maximize a scalar function, called the objective function.
org.apache.commons.math3.optim.linear
Optimization algorithms for linear constrained problems.
org.apache.commons.math3.optim.nonlinear.scalar
Algorithms for optimizing a scalar function.
org.apache.commons.math3.optim.nonlinear.scalar.gradient
This package provides optimization algorithms that require derivatives.
org.apache.commons.math3.optim.nonlinear.scalar.noderiv
This package provides optimization algorithms that do not require derivatives.
org.apache.commons.math3.optim.nonlinear.vector
Algorithms for optimizing a vector function.
org.apache.commons.math3.optim.nonlinear.vector.jacobian
This package provides optimization algorithms that require derivatives.
org.apache.commons.math3.optim.univariate
One-dimensional optimization algorithms.
org.apache.commons.math3.optimization
All classes and sub-packages of this package are deprecated.
org.apache.commons.math3.optimization.direct
This package provides optimization algorithms that don't require derivatives.
org.apache.commons.math3.optimization.fitting
This package provides classes to perform curve fitting.
org.apache.commons.math3.optimization.general
This package provides optimization algorithms that require derivatives.
org.apache.commons.math3.optimization.linear
This package provides optimization algorithms for linear constrained problems.
org.apache.commons.math3.optimization.univariate
Univariate real functions minimum finding algorithms.
org.apache.commons.math3.primes
Methods related to prime numbers like primality test, factor decomposition.
org.apache.commons.math3.random
Random number and random data generators.
org.apache.commons.math3.special
Implementations of special functions such as Beta and Gamma.
org.apache.commons.math3.stat
Data storage, manipulation and summary routines.
org.apache.commons.math3.stat.clustering
All classes and sub-packages of this package are deprecated.
org.apache.commons.math3.stat.correlation
Correlations/Covariance computations.
org.apache.commons.math3.stat.descriptive
Generic univariate summary statistic objects.
org.apache.commons.math3.stat.descriptive.moment
Summary statistics based on moments.
org.apache.commons.math3.stat.descriptive.rank
Summary statistics based on ranks.
org.apache.commons.math3.stat.descriptive.summary
Other summary statistics.
org.apache.commons.math3.stat.inference
Classes providing hypothesis testing and confidence interval construction.
org.apache.commons.math3.stat.ranking
Classes providing rank transformations.
org.apache.commons.math3.stat.regression
Statistical routines involving multivariate data.
org.apache.commons.math3.transform
Implementations of transform methods, including Fast Fourier transforms.
org.apache.commons.math3.util
Convenience routines and common data structures used throughout the commons-math library.
org.clapper.util.cmdline 
org.clapper.util.config
org.clapper.util.config - A Configuration File Parser.
org.clapper.util.config.test 
org.clapper.util.html 
org.clapper.util.html.test 
org.clapper.util.io
org.clapper.util.io - Input/Output Classes.
org.clapper.util.io.test 
org.clapper.util.logging
org.clapper.util.logging - Logging Classes.
org.clapper.util.misc
org.clapper.util.misc - Miscellaneous Utility Classes.
org.clapper.util.misc.test 
org.clapper.util.regex 
org.clapper.util.regex.test 
org.clapper.util.text
org.clapper.util.text - Text and String Classes.
org.clapper.util.text.test 
org.ejml 
org.ejml.alg.block 
org.ejml.alg.block.decomposition.bidiagonal 
org.ejml.alg.block.decomposition.chol 
org.ejml.alg.block.decomposition.hessenberg 
org.ejml.alg.block.decomposition.qr 
org.ejml.alg.block.linsol.chol 
org.ejml.alg.block.linsol.qr 
org.ejml.alg.dense.decomposition 
org.ejml.alg.dense.decomposition.bidiagonal 
org.ejml.alg.dense.decomposition.chol 
org.ejml.alg.dense.decomposition.eig 
org.ejml.alg.dense.decomposition.eig.symm 
org.ejml.alg.dense.decomposition.eig.watched 
org.ejml.alg.dense.decomposition.hessenberg 
org.ejml.alg.dense.decomposition.lu 
org.ejml.alg.dense.decomposition.qr 
org.ejml.alg.dense.decomposition.svd 
org.ejml.alg.dense.decomposition.svd.implicitqr 
org.ejml.alg.dense.linsol 
org.ejml.alg.dense.linsol.chol 
org.ejml.alg.dense.linsol.lu 
org.ejml.alg.dense.linsol.qr 
org.ejml.alg.dense.linsol.svd 
org.ejml.alg.dense.misc 
org.ejml.alg.dense.mult 
org.ejml.alg.generic 
org.ejml.data 
org.ejml.factory 
org.ejml.ops 
org.ejml.simple 
org.encog 
org.encog.app.analyst 
org.encog.app.analyst.analyze 
org.encog.app.analyst.commands 
org.encog.app.analyst.csv 
org.encog.app.analyst.csv.balance 
org.encog.app.analyst.csv.basic 
org.encog.app.analyst.csv.filter 
org.encog.app.analyst.csv.normalize 
org.encog.app.analyst.csv.process 
org.encog.app.analyst.csv.segregate 
org.encog.app.analyst.csv.shuffle 
org.encog.app.analyst.csv.sort 
org.encog.app.analyst.missing 
org.encog.app.analyst.report 
org.encog.app.analyst.script 
org.encog.app.analyst.script.ml 
org.encog.app.analyst.script.normalize 
org.encog.app.analyst.script.preprocess 
org.encog.app.analyst.script.process 
org.encog.app.analyst.script.prop 
org.encog.app.analyst.script.segregate 
org.encog.app.analyst.script.task 
org.encog.app.analyst.util 
org.encog.app.analyst.wizard 
org.encog.app.generate 
org.encog.app.generate.generators 
org.encog.app.generate.generators.cs 
org.encog.app.generate.generators.java 
org.encog.app.generate.generators.js 
org.encog.app.generate.generators.mql4 
org.encog.app.generate.generators.ninja 
org.encog.app.generate.program 
org.encog.app.quant 
org.encog.app.quant.indicators 
org.encog.app.quant.indicators.predictive 
org.encog.app.quant.loader 
org.encog.app.quant.loader.yahoo 
org.encog.app.quant.ninja 
org.encog.app.quant.util 
org.encog.bot 
org.encog.bot.browse 
org.encog.bot.browse.range 
org.encog.bot.dataunit 
org.encog.bot.rss 
org.encog.ca 
org.encog.ca.program 
org.encog.ca.program.basic 
org.encog.ca.program.conway 
org.encog.ca.program.elementary 
org.encog.ca.program.generic 
org.encog.ca.runner 
org.encog.ca.universe 
org.encog.ca.universe.basic 
org.encog.ca.visualize 
org.encog.ca.visualize.basic 
org.encog.engine.network.activation 
org.encog.ensemble 
org.encog.ensemble.adaboost 
org.encog.ensemble.aggregator 
org.encog.ensemble.bagging 
org.encog.ensemble.data 
org.encog.ensemble.data.factories 
org.encog.ensemble.ml.mlp.factory 
org.encog.ensemble.stacking 
org.encog.ensemble.training 
org.encog.mathutil 
org.encog.mathutil.dimension 
org.encog.mathutil.error 
org.encog.mathutil.libsvm 
org.encog.mathutil.matrices 
org.encog.mathutil.matrices.decomposition 
org.encog.mathutil.matrices.hessian 
org.encog.mathutil.probability 
org.encog.mathutil.probability.vars 
org.encog.mathutil.randomize 
org.encog.mathutil.randomize.factory 
org.encog.mathutil.rbf 
org.encog.ml 
org.encog.ml.anneal 
org.encog.ml.bayesian 
org.encog.ml.bayesian.bif 
org.encog.ml.bayesian.parse 
org.encog.ml.bayesian.query 
org.encog.ml.bayesian.query.enumerate 
org.encog.ml.bayesian.query.sample 
org.encog.ml.bayesian.table 
org.encog.ml.bayesian.training 
org.encog.ml.bayesian.training.estimator 
org.encog.ml.bayesian.training.search 
org.encog.ml.bayesian.training.search.k2 
org.encog.ml.data 
org.encog.ml.data.auto 
org.encog.ml.data.basic 
org.encog.ml.data.buffer 
org.encog.ml.data.buffer.codec 
org.encog.ml.data.folded 
org.encog.ml.data.market 
org.encog.ml.data.market.loader 
org.encog.ml.data.sparse 
org.encog.ml.data.specific 
org.encog.ml.data.temporal 
org.encog.ml.ea.codec 
org.encog.ml.ea.exception 
org.encog.ml.ea.genome 
org.encog.ml.ea.opp 
org.encog.ml.ea.opp.selection 
org.encog.ml.ea.population 
org.encog.ml.ea.rules 
org.encog.ml.ea.score 
org.encog.ml.ea.score.adjust 
org.encog.ml.ea.score.parallel 
org.encog.ml.ea.sort 
org.encog.ml.ea.species 
org.encog.ml.ea.train 
org.encog.ml.ea.train.basic 
org.encog.ml.factory 
org.encog.ml.factory.method 
org.encog.ml.factory.parse 
org.encog.ml.factory.train 
org.encog.ml.fitness 
org.encog.ml.fitting.gaussian 
org.encog.ml.fitting.linear 
org.encog.ml.genetic 
org.encog.ml.genetic.crossover 
org.encog.ml.genetic.genome 
org.encog.ml.genetic.mutate 
org.encog.ml.graph 
org.encog.ml.graph.search 
org.encog.ml.hmm 
org.encog.ml.hmm.alog 
org.encog.ml.hmm.distributions 
org.encog.ml.hmm.train.bw 
org.encog.ml.hmm.train.kmeans 
org.encog.ml.kmeans 
org.encog.ml.prg 
org.encog.ml.prg.expvalue 
org.encog.ml.prg.extension 
org.encog.ml.prg.generator 
org.encog.ml.prg.opp 
org.encog.ml.prg.species 
org.encog.ml.prg.train 
org.encog.ml.prg.train.rewrite 
org.encog.ml.schedule 
org.encog.ml.svm 
org.encog.ml.svm.training 
org.encog.ml.train 
org.encog.ml.train.strategy 
org.encog.ml.train.strategy.end 
org.encog.ml.tree 
org.encog.ml.tree.basic 
org.encog.ml.tree.traverse 
org.encog.ml.tree.traverse.tasks 
org.encog.ml.world 
org.encog.ml.world.basic 
org.encog.ml.world.grid 
org.encog.ml.world.grid.probability 
org.encog.ml.world.learning.mdp 
org.encog.ml.world.learning.q 
org.encog.neural 
org.encog.neural.art 
org.encog.neural.bam 
org.encog.neural.cpn 
org.encog.neural.cpn.training 
org.encog.neural.data 
org.encog.neural.data.basic 
org.encog.neural.error 
org.encog.neural.flat 
org.encog.neural.freeform 
org.encog.neural.freeform.basic 
org.encog.neural.freeform.factory 
org.encog.neural.freeform.task 
org.encog.neural.freeform.training 
org.encog.neural.hyperneat 
org.encog.neural.hyperneat.substrate 
org.encog.neural.neat 
org.encog.neural.neat.training 
org.encog.neural.neat.training.opp 
org.encog.neural.neat.training.opp.links 
org.encog.neural.neat.training.species 
org.encog.neural.networks 
org.encog.neural.networks.layers 
org.encog.neural.networks.structure 
org.encog.neural.networks.training 
org.encog.neural.networks.training.anneal 
org.encog.neural.networks.training.concurrent 
org.encog.neural.networks.training.concurrent.jobs 
org.encog.neural.networks.training.concurrent.performers 
org.encog.neural.networks.training.cross 
org.encog.neural.networks.training.lma 
org.encog.neural.networks.training.nm 
org.encog.neural.networks.training.pnn 
org.encog.neural.networks.training.propagation 
org.encog.neural.networks.training.propagation.back 
org.encog.neural.networks.training.propagation.manhattan 
org.encog.neural.networks.training.propagation.quick 
org.encog.neural.networks.training.propagation.resilient 
org.encog.neural.networks.training.propagation.scg 
org.encog.neural.networks.training.pso 
org.encog.neural.networks.training.simple 
org.encog.neural.networks.training.strategy 
org.encog.neural.pattern 
org.encog.neural.pnn 
org.encog.neural.prune 
org.encog.neural.rbf 
org.encog.neural.rbf.training 
org.encog.neural.som 
org.encog.neural.som.training 
org.encog.neural.som.training.basic 
org.encog.neural.som.training.basic.neighborhood 
org.encog.neural.som.training.clustercopy 
org.encog.neural.thermal 
org.encog.parse 
org.encog.parse.expression 
org.encog.parse.expression.common 
org.encog.parse.expression.epl 
org.encog.parse.expression.latex 
org.encog.parse.expression.rpn 
org.encog.parse.tags 
org.encog.parse.tags.read 
org.encog.parse.tags.write 
org.encog.persist 
org.encog.platformspecific.j2se 
org.encog.platformspecific.j2se.data 
org.encog.platformspecific.j2se.data.image 
org.encog.plugin 
org.encog.plugin.system 
org.encog.util 
org.encog.util.arrayutil 
org.encog.util.benchmark 
org.encog.util.concurrency 
org.encog.util.concurrency.job 
org.encog.util.csv 
org.encog.util.data 
org.encog.util.datastruct 
org.encog.util.downsample 
org.encog.util.error 
org.encog.util.file 
org.encog.util.http 
org.encog.util.identity 
org.encog.util.kmeans 
org.encog.util.logging 
org.encog.util.normalize 
org.encog.util.normalize.input 
org.encog.util.normalize.output 
org.encog.util.normalize.output.mapped 
org.encog.util.normalize.output.multiplicative 
org.encog.util.normalize.output.nominal 
org.encog.util.normalize.output.zaxis 
org.encog.util.normalize.segregate 
org.encog.util.normalize.segregate.index 
org.encog.util.normalize.target 
org.encog.util.obj 
org.encog.util.simple 
org.encog.util.text 
org.encog.util.time 
org.encog.util.validate 
org.encog.visualize 
org.freehep.math.minuit
User API for the JMinuit package.
org.freehep.util
Generic utility classes for FreeHEP.
org.freehep.util.images
Image handler to (pre-)load images and icons.
org.freehep.util.io
Set of Streams, Readers, Writers, Encoders and Decoders.
org.freehep.util.template
A simple template engine.
org.jfin.date 
org.jfin.date.accrual 
org.jfin.date.accrual.impl 
org.jfin.date.daycount 
org.jfin.date.daycount.defaultimpl 
org.jfin.date.holiday 
org.jfin.date.holiday.defaultimpl 
org.jfin.date.holiday.financialcalendarimpl 
org.jfin.date.util 
org.jfree.chart
Core classes, including JFreeChart and ChartPanel.
org.jfree.chart.annotations
A framework for addings annotations to charts.
org.jfree.chart.axis
Axis classes and interfaces.
org.jfree.chart.block
Blocks and layout classes used extensively by the LegendTitle class.
org.jfree.chart.demo
Some basic demos to get you started.
org.jfree.chart.editor
Provides a simple (but so far incomplete) framework for editing chart properties.
org.jfree.chart.encoders
Classes related to the encoding of charts to different image formats.
org.jfree.chart.entity
Classes representing components of (or entities in) a chart.
org.jfree.chart.event
Event classes and listener interfaces, used to provide a change notification mechanism so that charts are automatically redrawn whenever changes are made to any chart component.
org.jfree.chart.imagemap
Classes, including ImageMapUtilities, for creating HTML image maps.
org.jfree.chart.labels
Generators and other classes used for the display of item labels and tooltips.
org.jfree.chart.needle
A range of objects that can be used to represent the needle on a CompassPlot.
org.jfree.chart.panel
Classes related to the ChartPanel class.
org.jfree.chart.plot
Plot classes and related interfaces.
org.jfree.chart.plot.dial
Classes for creating dial plots.
org.jfree.chart.renderer
Core support for the plug-in renderers used by the CategoryPlot and XYPlot classes.
org.jfree.chart.renderer.category
Plug-in renderers for the CategoryPlot class.
org.jfree.chart.renderer.xy
Plug-in renderers for the XYPlot class.
org.jfree.chart.resources
Localised resources for the JFreeChart class library.
org.jfree.chart.servlet
Classes for providing useful servlet and JSP functionality.
org.jfree.chart.title
Classes used to display chart titles and subtitles.
org.jfree.chart.urls
Classes for adding URLS to charts for HTML image map generation.
org.jfree.chart.util
Utility classes used by JFreeChart.
org.jfree.data
The base package for classes that represent various types of data.
org.jfree.data.category
A package containing the CategoryDataset interface and related classes.
org.jfree.data.contour
Datasets used by the ContourPlot class.
org.jfree.data.function
Representation for simple functions.
org.jfree.data.gantt
Data interfaces and classes for Gantt charts.
org.jfree.data.general
Data interfaces and classes.
org.jfree.data.io
Miscellaneous support for input/output of data.
org.jfree.data.jdbc
Dataset classes that fetch data from a database via JDBC.
org.jfree.data.resources
Resource bundles for items that require localisation.
org.jfree.data.statistics
Classes for representing statistical data.
org.jfree.data.time
Interfaces and classes for time-related data.
org.jfree.data.time.ohlc
Classes for representing financial data in open-high-low-close form.
org.jfree.data.xml
Support for reading datasets from XML files.
org.jfree.data.xy
A package containing the XYDataset interface and related classes.
org.jgap
Houses the interfaces and classes that make up the core of JGAP.
org.jgap.audit
Functions related to evaluating the behaviour of JGAP JGAP.
org.jgap.data
Related to persisting the state of JGAP objects (Genotype, Chromosome etc.)
org.jgap.data.config
Related to configuring JGAP
org.jgap.distr
Distributed Computing of populations of a Genetic Algorithm
org.jgap.distr.grid
Grid functionality for building a distributed computing network with server, worker(s) and client(s)
org.jgap.distr.grid.common
Common classes for grid computing
org.jgap.distr.grid.gp
Grid computing for GP
org.jgap.distr.grid.request
Work requests in grid computing
org.jgap.distr.grid.util
Utilities for grid computing
org.jgap.distr.grid.wan
Grid access via WAN, e.g.
org.jgap.eval
Auditing performance of JGAP with different configurations
org.jgap.event
Contains classes and interfaces related to the generation and handling of JGAP events.
org.jgap.gp
Genetic Programming functionality (abstract classes and interfaces)
org.jgap.gp.function
Functions to use with Genetic Programming.
org.jgap.gp.function.statistics 
org.jgap.gp.impl
Genetic Programming classes, non-abstract, no interfaces
org.jgap.gp.terminal
Terminals to use with Genetic Programming.
org.jgap.gui
Graphical user interface for JGAP
org.jgap.impl
Provides stock implementations of the various sub-components that can be plugged-in or custom implemented.
org.jgap.impl.fitness
Functionality related to fitness value computation
org.jgap.impl.job
Splitting a evolution request into chunks (jobs) in order to compute them distributedly.
org.jgap.impl.salesman
Handling of Traveling Salesman Person (TSP) related problems
org.jgap.supergenes
Supergene represents several loci, which control closely related aspects of the phenotype.
org.jgap.symbolic 
org.jgap.util
Houses common-sense utility classes used within JGAP.
org.jgap.util.tree 
org.jgap.xml
Writing/Reading JGAP object states (Genotype, Chromosome etc.) to/from XML documents
org.jscience
Provides the library classes for versionning, self-tests and performance analysis.
org.jscience.economics.money
Provides support for monetary quantities and their currencies.
org.jscience.geography.coordinates
Provides linear or angular quantities which designate the position that a point occupies in a given reference frame or system.
org.jscience.geography.coordinates.crs
Provides the Coordinate Reference Systems (CRS) specifying how coordinates are to be assigned to spatial/temporal locations.
org.jscience.mathematics.function
Provides support for fairly simple symbolic math analysis (to solve algebraic equations, integrate, differentiate, calculate expressions, and so on).
org.jscience.mathematics.number
Provides common types of numbers most of them implementing the field interface.
org.jscience.mathematics.structure
Provides mathematical sets (identified by the class parameter) associated to binary operations, such as multiplication or addition, satisfying certain axioms.
org.jscience.mathematics.vector
Provides support for linear algebra in the form of matrices and vectors.
org.jscience.physics.amount
Provides support for exact or arbitrary precision measurements.
org.jscience.physics.model
Provides models for physical quantities.
org.mapdb 
org.matheclipse.combinatoric 
org.matheclipse.combinatoric.util 
org.matheclipse.commons.math.analysis.solvers 
org.matheclipse.commons.math.linear 
org.matheclipse.core.basic 
org.matheclipse.core.boole 
org.matheclipse.core.builtin.constant 
org.matheclipse.core.builtin.function 
org.matheclipse.core.convert 
org.matheclipse.core.eval 
org.matheclipse.core.eval.exception 
org.matheclipse.core.eval.interfaces 
org.matheclipse.core.eval.util 
org.matheclipse.core.expression
Provides the implementations of the abstract syntax tree (AST) which represents the MathEclipse expressions.
See AddNewFunctions
org.matheclipse.core.form.mathml 
org.matheclipse.core.form.mathml.reflection 
org.matheclipse.core.form.output 
org.matheclipse.core.form.tex 
org.matheclipse.core.form.tex.reflection 
org.matheclipse.core.generic 
org.matheclipse.core.generic.combinatoric
Provides Iterables and Iteratorsfor combinatorial algortihms.
org.matheclipse.core.generic.interfaces
Provides interfaces for the nested lists libray.
org.matheclipse.core.generic.util 
org.matheclipse.core.integrate.rubi 
org.matheclipse.core.integrate.rubi42 
org.matheclipse.core.interfaces 
org.matheclipse.core.list.algorithms 
org.matheclipse.core.patternmatching 
org.matheclipse.core.polynomials 
org.matheclipse.core.reflection.system 
org.matheclipse.core.stat.descriptive 
org.matheclipse.core.stat.descriptive.summary
Other summary statistics.
org.matheclipse.core.util 
org.matheclipse.core.visit 
org.matheclipse.parser.client
Provides the parser and scanner implementation.
org.matheclipse.parser.client.ast
Provides the implementations of the abstract syntax tree classes.
org.matheclipse.parser.client.eval
Predefined evaluation engines.
org.matheclipse.parser.client.eval.api
Interfaces for visiting and evaluating the nodes of an abstract syntax tree.
org.matheclipse.parser.client.math
Math utilities.
org.matheclipse.parser.client.operator
Provides the operator classes (i.e.
org.matheclipse.parser.server.util
A Console application to test the evaluators interactively.
org.netlib.arpack 
org.netlib.blas 
org.netlib.generate 
org.netlib.lapack 
org.netlib.utils 
org.opengis.referencing.cs 
tig
Contains general utility classes.
tig.html 
tig.maths
Contains useful maths classes.
tig.swing
Contains swing components and utilities.
tig.tree 
tig.xml 
umontreal.iro.lecuyer.charts 
umontreal.iro.lecuyer.functionfit 
umontreal.iro.lecuyer.functions 
umontreal.iro.lecuyer.gof 
umontreal.iro.lecuyer.hups 
umontreal.iro.lecuyer.probdist 
umontreal.iro.lecuyer.probdistmulti 
umontreal.iro.lecuyer.randvar 
umontreal.iro.lecuyer.randvarmulti 
umontreal.iro.lecuyer.rng 
umontreal.iro.lecuyer.simevents 
umontreal.iro.lecuyer.simevents.eventlist 
umontreal.iro.lecuyer.simprocs 
umontreal.iro.lecuyer.stat 
umontreal.iro.lecuyer.stat.list 
umontreal.iro.lecuyer.stochprocess 
umontreal.iro.lecuyer.util 
vmm3d.actions 
vmm3d.conformalmap 
vmm3d.core 
vmm3d.core3D 
vmm3d.fourier 
vmm3d.fractals 
vmm3d.functions 
vmm3d.latticemodel 
vmm3d.ode 
vmm3d.ode.firstorder1D 
vmm3d.ode.firstorder2D 
vmm3d.ode.firstorder3D 
vmm3d.ode.secondorder1D 
vmm3d.ode.secondorder2D 
vmm3d.ode.secondorder3D 
vmm3d.planecurve 
vmm3d.planecurve.parametric 
vmm3d.polyhedron 
vmm3d.pseudospherical 
vmm3d.spacecurve 
vmm3d.spacecurve.parametric 
vmm3d.surface 
vmm3d.surface.implicit 
vmm3d.surface.parametric 
vmm3d.xm3d 

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