edu.rit.compbio.seq

Package edu.rit.compbio.seq

Package edu.rit.compbio.seq contains parallel programs for biological sequence alignment.

See: Description

Package edu.rit.compbio.seq Description

Package edu.rit.compbio.seq contains parallel programs for biological sequence alignment.

The following programs search a protein sequence database to find matches for a query protein sequence:

The following class encapsulates a protein sequence database; it includes a main program that prepares a database index file used by the above protein sequence database search programs:

The other classes are used by the above programs.

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