Descriptive
cern.jet.stat

Class Descriptive



  • public class Descriptiveextends Object
    Basic descriptive statistics.
    • Method Summary

      Methods 
      Modifier and TypeMethod and Description
      static doubleautoCorrelation(DoubleArrayList data, int lag, double mean, double variance)
      Returns the auto-correlation of a data sequence.
      static doublecorrelation(DoubleArrayList data1, double standardDev1, DoubleArrayList data2, double standardDev2)
      Returns the correlation of two data sequences.
      static doublecovariance(DoubleArrayList data1, DoubleArrayList data2)
      Returns the covariance of two data sequences, which is cov(x,y) = (1/(size()-1)) * Sum((x[i]-mean(x)) * (y[i]-mean(y))).
      static doubledurbinWatson(DoubleArrayList data)
      Durbin-Watson computation.
      static voidfrequencies(DoubleArrayList sortedData, DoubleArrayList distinctValues, IntArrayList frequencies)
      Computes the frequency (number of occurances, count) of each distinct value in the given sorted data.
      static doublegeometricMean(DoubleArrayList data)
      Returns the geometric mean of a data sequence.
      static doublegeometricMean(int size, double sumOfLogarithms)
      Returns the geometric mean of a data sequence.
      static doubleharmonicMean(int size, double sumOfInversions)
      Returns the harmonic mean of a data sequence.
      static voidincrementalUpdate(DoubleArrayList data, int from, int to, double[] inOut)
      Incrementally maintains and updates minimum, maximum, sum and sum of squares of a data sequence.
      static voidincrementalUpdateSumsOfPowers(DoubleArrayList data, int from, int to, int fromSumIndex, int toSumIndex, double[] sumOfPowers)
      Incrementally maintains and updates various sums of powers of the form Sum(data[i]k).
      static voidincrementalWeightedUpdate(DoubleArrayList data, DoubleArrayList weights, int from, int to, double[] inOut)
      Incrementally maintains and updates sum and sum of squares of a weighted data sequence.
      static doublekurtosis(DoubleArrayList data, double mean, double standardDeviation)
      Returns the kurtosis (aka excess) of a data sequence, which is -3 + moment(data,4,mean) / standardDeviation4.
      static doublekurtosis(double moment4, double standardDeviation)
      Returns the kurtosis (aka excess) of a data sequence.
      static doublelag1(DoubleArrayList data, double mean)
      Returns the lag-1 autocorrelation of a dataset; Note that this method has semantics different from autoCorrelation(..., 1);
      static doublemax(DoubleArrayList data)
      Returns the largest member of a data sequence.
      static doublemean(DoubleArrayList data)
      Returns the arithmetic mean of a data sequence; That is Sum( data[i] ) / data.size().
      static doublemeanDeviation(DoubleArrayList data, double mean)
      Returns the mean deviation of a dataset.
      static doublemedian(DoubleArrayList sortedData)
      Returns the median of a sorted data sequence.
      static doublemin(DoubleArrayList data)
      Returns the smallest member of a data sequence.
      static doublemoment(DoubleArrayList data, int k, double c)
      Returns the moment of k-th order with constant c of a data sequence, which is Sum( (data[i]-c)k ) / data.size().
      static doublemoment(int k, double c, int size, double[] sumOfPowers)
      Returns the moment of k-th order with constant c of a data sequence, which is Sum( (data[i]-c)k ) / data.size().
      static doublepooledMean(int size1, double mean1, int size2, double mean2)
      Returns the pooled mean of two data sequences.
      static doublepooledVariance(int size1, double variance1, int size2, double variance2)
      Returns the pooled variance of two data sequences.
      static doubleproduct(DoubleArrayList data)
      Returns the product of a data sequence, which is Prod( data[i] ).
      static doubleproduct(int size, double sumOfLogarithms)
      Returns the product, which is Prod( data[i] ).
      static doublequantile(DoubleArrayList sortedData, double phi)
      Returns the phi-quantile; that is, an element elem for which holds that phi percent of data elements are less than elem.
      static doublequantileInverse(DoubleArrayList sortedList, double element)
      Returns how many percent of the elements contained in the receiver are <= element.
      static DoubleArrayListquantiles(DoubleArrayList sortedData, DoubleArrayList percentages)
      Returns the quantiles of the specified percentages.
      static doublerankInterpolated(DoubleArrayList sortedList, double element)
      Returns the linearly interpolated number of elements in a list less or equal to a given element.
      static doublerms(int size, double sumOfSquares)
      Returns the RMS (Root-Mean-Square) of a data sequence.
      static doublesampleKurtosis(DoubleArrayList data, double mean, double sampleVariance)
      Returns the sample kurtosis (aka excess) of a data sequence.
      static doublesampleKurtosis(int size, double moment4, double sampleVariance)
      Returns the sample kurtosis (aka excess) of a data sequence.
      static doublesampleKurtosisStandardError(int size)
      Return the standard error of the sample kurtosis.
      static doublesampleSkew(DoubleArrayList data, double mean, double sampleVariance)
      Returns the sample skew of a data sequence.
      static doublesampleSkew(int size, double moment3, double sampleVariance)
      Returns the sample skew of a data sequence.
      static doublesampleSkewStandardError(int size)
      Return the standard error of the sample skew.
      static doublesampleStandardDeviation(int size, double sampleVariance)
      Returns the sample standard deviation.
      static doublesampleVariance(DoubleArrayList data, double mean)
      Returns the sample variance of a data sequence.
      static doublesampleVariance(int size, double sum, double sumOfSquares)
      Returns the sample variance of a data sequence.
      static doublesampleWeightedVariance(double sumOfWeights, double sumOfProducts, double sumOfSquaredProducts)
      Returns the sample weighted variance of a data sequence.
      static doubleskew(DoubleArrayList data, double mean, double standardDeviation)
      Returns the skew of a data sequence, which is moment(data,3,mean) / standardDeviation3.
      static doubleskew(double moment3, double standardDeviation)
      Returns the skew of a data sequence.
      static DoubleArrayList[]split(DoubleArrayList sortedList, DoubleArrayList splitters)
      Splits (partitions) a list into sublists such that each sublist contains the elements with a given range.
      static doublestandardDeviation(double variance)
      Returns the standard deviation from a variance.
      static doublestandardError(int size, double variance)
      Returns the standard error of a data sequence.
      static voidstandardize(DoubleArrayList data, double mean, double standardDeviation)
      Modifies a data sequence to be standardized.
      static doublesum(DoubleArrayList data)
      Returns the sum of a data sequence.
      static doublesumOfInversions(DoubleArrayList data, int from, int to)
      Returns the sum of inversions of a data sequence, which is Sum( 1.0 / data[i]).
      static doublesumOfLogarithms(DoubleArrayList data, int from, int to)
      Returns the sum of logarithms of a data sequence, which is Sum( Log(data[i]).
      static doublesumOfPowerDeviations(DoubleArrayList data, int k, double c)
      Returns Sum( (data[i]-c)k ); optimized for common parameters like c == 0.0 and/or k == -2 ..
      static doublesumOfPowerDeviations(DoubleArrayList data, int k, double c, int from, int to)
      Returns Sum( (data[i]-c)k ) for all i = from ..
      static doublesumOfPowers(DoubleArrayList data, int k)
      Returns the sum of powers of a data sequence, which is Sum ( data[i]k ).
      static doublesumOfSquaredDeviations(int size, double variance)
      Returns the sum of squared mean deviation of of a data sequence.
      static doublesumOfSquares(DoubleArrayList data)
      Returns the sum of squares of a data sequence.
      static doubletrimmedMean(DoubleArrayList sortedData, double mean, int left, int right)
      Returns the trimmed mean of a sorted data sequence.
      static doublevariance(double standardDeviation)
      Returns the variance from a standard deviation.
      static doublevariance(int size, double sum, double sumOfSquares)
      Returns the variance of a data sequence.
      static doubleweightedMean(DoubleArrayList data, DoubleArrayList weights)
      Returns the weighted mean of a data sequence.
      static doubleweightedRMS(double sumOfProducts, double sumOfSquaredProducts)
      Returns the weighted RMS (Root-Mean-Square) of a data sequence.
      static doublewinsorizedMean(DoubleArrayList sortedData, double mean, int left, int right)
      Returns the winsorized mean of a sorted data sequence.
    • Method Detail

      • autoCorrelation

        public static double autoCorrelation(DoubleArrayList data,                     int lag,                     double mean,                     double variance)
        Returns the auto-correlation of a data sequence.
      • correlation

        public static double correlation(DoubleArrayList data1,                 double standardDev1,                 DoubleArrayList data2,                 double standardDev2)
        Returns the correlation of two data sequences. That is covariance(data1,data2)/(standardDev1*standardDev2).
      • covariance

        public static double covariance(DoubleArrayList data1,                DoubleArrayList data2)
        Returns the covariance of two data sequences, which is cov(x,y) = (1/(size()-1)) * Sum((x[i]-mean(x)) * (y[i]-mean(y))). See the math definition.
      • durbinWatson

        public static double durbinWatson(DoubleArrayList data)
        Durbin-Watson computation.
      • frequencies

        public static void frequencies(DoubleArrayList sortedData,               DoubleArrayList distinctValues,               IntArrayList frequencies)
        Computes the frequency (number of occurances, count) of each distinct value in the given sorted data. After this call returns both distinctValues and frequencies have a new size (which is equal for both), which is the number of distinct values in the sorted data.

        Distinct values are filled into distinctValues, starting at index 0. The frequency of each distinct value is filled into frequencies, starting at index 0. As a result, the smallest distinct value (and its frequency) can be found at index 0, the second smallest distinct value (and its frequency) at index 1, ..., the largest distinct value (and its frequency) at index distinctValues.size()-1. Example:
        elements = (5,6,6,7,8,8) --> distinctValues = (5,6,7,8), frequencies = (1,2,1,2)

        Parameters:
        sortedData - the data; must be sorted ascending.
        distinctValues - a list to be filled with the distinct values; can have any size.
        frequencies - a list to be filled with the frequencies; can have any size; set this parameter to null to ignore it.
      • geometricMean

        public static double geometricMean(int size,                   double sumOfLogarithms)
        Returns the geometric mean of a data sequence. Note that for a geometric mean to be meaningful, the minimum of the data sequence must not be less or equal to zero.
        The geometric mean is given by pow( Product( data[i] ), 1/size) which is equivalent to Math.exp( Sum( Log(data[i]) ) / size).
      • geometricMean

        public static double geometricMean(DoubleArrayList data)
        Returns the geometric mean of a data sequence. Note that for a geometric mean to be meaningful, the minimum of the data sequence must not be less or equal to zero.
        The geometric mean is given by pow( Product( data[i] ), 1/data.size()). This method tries to avoid overflows at the expense of an equivalent but somewhat slow definition: geo = Math.exp( Sum( Log(data[i]) ) / data.size()).
      • harmonicMean

        public static double harmonicMean(int size,                  double sumOfInversions)
        Returns the harmonic mean of a data sequence.
        Parameters:
        size - the number of elements in the data sequence.
        sumOfInversions - Sum( 1.0 / data[i]).
      • incrementalUpdate

        public static void incrementalUpdate(DoubleArrayList data,                     int from,                     int to,                     double[] inOut)
        Incrementally maintains and updates minimum, maximum, sum and sum of squares of a data sequence. Assume we have already recorded some data sequence elements and know their minimum, maximum, sum and sum of squares. Assume further, we are to record some more elements and to derive updated values of minimum, maximum, sum and sum of squares.

        This method computes those updated values without needing to know the already recorded elements. This is interesting for interactive online monitoring and/or applications that cannot keep the entire huge data sequence in memory.


        Definition of sumOfSquares: sumOfSquares(n) = Sum ( data[i] * data[i] ).

        Parameters:
        data - the additional elements to be incorporated into min, max, etc.
        from - the index of the first element within data to consider.
        to - the index of the last element within data to consider. The method incorporates elements data[from], ..., data[to].
        inOut - the old values in the following format:
        • inOut[0] is the old minimum.
        • inOut[1] is the old maximum.
        • inOut[2] is the old sum.
        • inOut[3] is the old sum of squares.
        If no data sequence elements have so far been recorded set the values as follows
        • inOut[0] = Double.POSITIVE_INFINITY as the old minimum.
        • inOut[1] = Double.NEGATIVE_INFINITY as the old maximum.
        • inOut[2] = 0.0 as the old sum.
        • inOut[3] = 0.0 as the old sum of squares.
      • incrementalUpdateSumsOfPowers

        public static void incrementalUpdateSumsOfPowers(DoubleArrayList data,                                 int from,                                 int to,                                 int fromSumIndex,                                 int toSumIndex,                                 double[] sumOfPowers)
        Incrementally maintains and updates various sums of powers of the form Sum(data[i]k). Assume we have already recorded some data sequence elements data[i] and know the values of Sum(data[i]from), Sum(data[i]from+1), ..., Sum(data[i]to). Assume further, we are to record some more elements and to derive updated values of these sums.

        This method computes those updated values without needing to know the already recorded elements. This is interesting for interactive online monitoring and/or applications that cannot keep the entire huge data sequence in memory. For example, the incremental computation of moments is based upon such sums of powers:

        The moment of k-th order with constant c of a data sequence, is given by Sum( (data[i]-c)k ) / data.size(). It can incrementally be computed by using the equivalent formula

        moment(k,c) = m(k,c) / data.size() where
        m(k,c) = Sum( -1i * b(k,i) * ci * sumOfPowers(k-i)) for i = 0 .. k and
        b(k,i) = binomial(k,i) and
        sumOfPowers(k) = Sum( data[i]k ).

        Parameters:
        data - the additional elements to be incorporated into min, max, etc.
        from - the index of the first element within data to consider.
        to - the index of the last element within data to consider. The method incorporates elements data[from], ..., data[to].
        inOut - the old values of the sums in the following format:
        • sumOfPowers[0] is the old Sum(data[i]fromSumIndex).
        • sumOfPowers[1] is the old Sum(data[i]fromSumIndex+1).
        • ...
        • sumOfPowers[toSumIndex-fromSumIndex] is the old Sum(data[i]toSumIndex).
        If no data sequence elements have so far been recorded set all old values of the sums to 0.0.
      • incrementalWeightedUpdate

        public static void incrementalWeightedUpdate(DoubleArrayList data,                             DoubleArrayList weights,                             int from,                             int to,                             double[] inOut)
        Incrementally maintains and updates sum and sum of squares of a weighted data sequence. Assume we have already recorded some data sequence elements and know their sum and sum of squares. Assume further, we are to record some more elements and to derive updated values of sum and sum of squares.

        This method computes those updated values without needing to know the already recorded elements. This is interesting for interactive online monitoring and/or applications that cannot keep the entire huge data sequence in memory.


        Definition of sum: sum = Sum ( data[i] * weights[i] ).
        Definition of sumOfSquares: sumOfSquares = Sum ( data[i] * data[i] * weights[i]).

        Parameters:
        data - the additional elements to be incorporated into min, max, etc.
        weights - the weight of each element within data.
        from - the index of the first element within data (and weights) to consider.
        to - the index of the last element within data (and weights) to consider. The method incorporates elements data[from], ..., data[to].
        inOut - the old values in the following format:
        • inOut[0] is the old sum.
        • inOut[1] is the old sum of squares.
        If no data sequence elements have so far been recorded set the values as follows
        • inOut[0] = 0.0 as the old sum.
        • inOut[1] = 0.0 as the old sum of squares.
      • kurtosis

        public static double kurtosis(double moment4,              double standardDeviation)
        Returns the kurtosis (aka excess) of a data sequence.
        Parameters:
        moment4 - the fourth central moment, which is moment(data,4,mean).
        standardDeviation - the standardDeviation.
      • kurtosis

        public static double kurtosis(DoubleArrayList data,              double mean,              double standardDeviation)
        Returns the kurtosis (aka excess) of a data sequence, which is -3 + moment(data,4,mean) / standardDeviation4.
      • lag1

        public static double lag1(DoubleArrayList data,          double mean)
        Returns the lag-1 autocorrelation of a dataset; Note that this method has semantics different from autoCorrelation(..., 1);
      • max

        public static double max(DoubleArrayList data)
        Returns the largest member of a data sequence.
      • mean

        public static double mean(DoubleArrayList data)
        Returns the arithmetic mean of a data sequence; That is Sum( data[i] ) / data.size().
      • meanDeviation

        public static double meanDeviation(DoubleArrayList data,                   double mean)
        Returns the mean deviation of a dataset. That is Sum (Math.abs(data[i]-mean)) / data.size()).
      • median

        public static double median(DoubleArrayList sortedData)
        Returns the median of a sorted data sequence.
        Parameters:
        sortedData - the data sequence; must be sorted ascending.
      • min

        public static double min(DoubleArrayList data)
        Returns the smallest member of a data sequence.
      • moment

        public static double moment(int k,            double c,            int size,            double[] sumOfPowers)
        Returns the moment of k-th order with constant c of a data sequence, which is Sum( (data[i]-c)k ) / data.size().
        Parameters:
        sumOfPowers - sumOfPowers[m] == Sum( data[i]m) ) for m = 0,1,..,k as returned by method incrementalUpdateSumsOfPowers(DoubleArrayList,int,int,int,int,double[]). In particular there must hold sumOfPowers.length == k+1.
        size - the number of elements of the data sequence.
      • moment

        public static double moment(DoubleArrayList data,            int k,            double c)
        Returns the moment of k-th order with constant c of a data sequence, which is Sum( (data[i]-c)k ) / data.size().
      • pooledMean

        public static double pooledMean(int size1,                double mean1,                int size2,                double mean2)
        Returns the pooled mean of two data sequences. That is (size1 * mean1 + size2 * mean2) / (size1 + size2).
        Parameters:
        size1 - the number of elements in data sequence 1.
        mean1 - the mean of data sequence 1.
        size2 - the number of elements in data sequence 2.
        mean2 - the mean of data sequence 2.
      • pooledVariance

        public static double pooledVariance(int size1,                    double variance1,                    int size2,                    double variance2)
        Returns the pooled variance of two data sequences. That is (size1 * variance1 + size2 * variance2) / (size1 + size2);
        Parameters:
        size1 - the number of elements in data sequence 1.
        variance1 - the variance of data sequence 1.
        size2 - the number of elements in data sequence 2.
        variance2 - the variance of data sequence 2.
      • product

        public static double product(int size,             double sumOfLogarithms)
        Returns the product, which is Prod( data[i] ). In other words: data[0]*data[1]*...*data[data.size()-1]. This method uses the equivalent definition: prod = pow( exp( Sum( Log(x[i]) ) / size(), size()).
      • product

        public static double product(DoubleArrayList data)
        Returns the product of a data sequence, which is Prod( data[i] ). In other words: data[0]*data[1]*...*data[data.size()-1]. Note that you may easily get numeric overflows.
      • quantile

        public static double quantile(DoubleArrayList sortedData,              double phi)
        Returns the phi-quantile; that is, an element elem for which holds that phi percent of data elements are less than elem. The quantile need not necessarily be contained in the data sequence, it can be a linear interpolation.
        Parameters:
        sortedData - the data sequence; must be sorted ascending.
        phi - the percentage; must satisfy 0 <= phi <= 1.
      • quantileInverse

        public static double quantileInverse(DoubleArrayList sortedList,                     double element)
        Returns how many percent of the elements contained in the receiver are <= element. Does linear interpolation if the element is not contained but lies in between two contained elements.
        Parameters:
        sortedList - the list to be searched (must be sorted ascending).
        element - the element to search for.
        Returns:
        the percentage phi of elements <= element (0.0 <= phi <= 1.0).
      • quantiles

        public static DoubleArrayList quantiles(DoubleArrayList sortedData,                        DoubleArrayList percentages)
        Returns the quantiles of the specified percentages. The quantiles need not necessarily be contained in the data sequence, it can be a linear interpolation.
        Parameters:
        sortedData - the data sequence; must be sorted ascending.
        percentages - the percentages for which quantiles are to be computed. Each percentage must be in the interval [0.0,1.0].
        Returns:
        the quantiles.
      • rankInterpolated

        public static double rankInterpolated(DoubleArrayList sortedList,                      double element)
        Returns the linearly interpolated number of elements in a list less or equal to a given element. The rank is the number of elements <= element. Ranks are of the form {0, 1, 2,..., sortedList.size()}. If no element is <= element, then the rank is zero. If the element lies in between two contained elements, then linear interpolation is used and a non integer value is returned.
        Parameters:
        sortedList - the list to be searched (must be sorted ascending).
        element - the element to search for.
        Returns:
        the rank of the element.
      • rms

        public static double rms(int size,         double sumOfSquares)
        Returns the RMS (Root-Mean-Square) of a data sequence. That is Math.sqrt(Sum( data[i]*data[i] ) / data.size()). The RMS of data sequence is the square-root of the mean of the squares of the elements in the data sequence. It is a measure of the average "size" of the elements of a data sequence.
        Parameters:
        sumOfSquares - sumOfSquares(data) == Sum( data[i]*data[i] ) of the data sequence.
        size - the number of elements in the data sequence.
      • sampleKurtosis

        public static double sampleKurtosis(int size,                    double moment4,                    double sampleVariance)
        Returns the sample kurtosis (aka excess) of a data sequence. Ref: R.R. Sokal, F.J. Rohlf, Biometry: the principles and practice of statistics in biological research (W.H. Freeman and Company, New York, 1998, 3rd edition) p. 114-115.
        Parameters:
        size - the number of elements of the data sequence.
        moment4 - the fourth central moment, which is moment(data,4,mean).
        sampleVariance - the sample variance.
      • sampleKurtosis

        public static double sampleKurtosis(DoubleArrayList data,                    double mean,                    double sampleVariance)
        Returns the sample kurtosis (aka excess) of a data sequence.
      • sampleKurtosisStandardError

        public static double sampleKurtosisStandardError(int size)
        Return the standard error of the sample kurtosis. Ref: R.R. Sokal, F.J. Rohlf, Biometry: the principles and practice of statistics in biological research (W.H. Freeman and Company, New York, 1998, 3rd edition) p. 138.
        Parameters:
        size - the number of elements of the data sequence.
      • sampleSkew

        public static double sampleSkew(int size,                double moment3,                double sampleVariance)
        Returns the sample skew of a data sequence. Ref: R.R. Sokal, F.J. Rohlf, Biometry: the principles and practice of statistics in biological research (W.H. Freeman and Company, New York, 1998, 3rd edition) p. 114-115.
        Parameters:
        size - the number of elements of the data sequence.
        moment3 - the third central moment, which is moment(data,3,mean).
        sampleVariance - the sample variance.
      • sampleSkew

        public static double sampleSkew(DoubleArrayList data,                double mean,                double sampleVariance)
        Returns the sample skew of a data sequence.
      • sampleSkewStandardError

        public static double sampleSkewStandardError(int size)
        Return the standard error of the sample skew. Ref: R.R. Sokal, F.J. Rohlf, Biometry: the principles and practice of statistics in biological research (W.H. Freeman and Company, New York, 1998, 3rd edition) p. 138.
        Parameters:
        size - the number of elements of the data sequence.
      • sampleStandardDeviation

        public static double sampleStandardDeviation(int size,                             double sampleVariance)
        Returns the sample standard deviation. Ref: R.R. Sokal, F.J. Rohlf, Biometry: the principles and practice of statistics in biological research (W.H. Freeman and Company, New York, 1998, 3rd edition) p. 53.
        Parameters:
        size - the number of elements of the data sequence.
        sampleVariance - the sample variance.
      • sampleVariance

        public static double sampleVariance(int size,                    double sum,                    double sumOfSquares)
        Returns the sample variance of a data sequence. That is (sumOfSquares - mean*sum) / (size - 1) with mean = sum/size.
        Parameters:
        size - the number of elements of the data sequence.
        sum - == Sum( data[i] ).
        sumOfSquares - == Sum( data[i]*data[i] ).
      • sampleVariance

        public static double sampleVariance(DoubleArrayList data,                    double mean)
        Returns the sample variance of a data sequence. That is Sum ( (data[i]-mean)^2 ) / (data.size()-1).
      • sampleWeightedVariance

        public static double sampleWeightedVariance(double sumOfWeights,                            double sumOfProducts,                            double sumOfSquaredProducts)
        Returns the sample weighted variance of a data sequence. That is (sumOfSquaredProducts - sumOfProducts * sumOfProducts / sumOfWeights) / (sumOfWeights - 1).
        Parameters:
        sumOfWeights - == Sum( weights[i] ).
        sumOfProducts - == Sum( data[i] * weights[i] ).
        sumOfSquaredProducts - == Sum( data[i] * data[i] * weights[i] ).
      • skew

        public static double skew(double moment3,          double standardDeviation)
        Returns the skew of a data sequence.
        Parameters:
        moment3 - the third central moment, which is moment(data,3,mean).
        standardDeviation - the standardDeviation.
      • skew

        public static double skew(DoubleArrayList data,          double mean,          double standardDeviation)
        Returns the skew of a data sequence, which is moment(data,3,mean) / standardDeviation3.
      • split

        public static DoubleArrayList[] split(DoubleArrayList sortedList,                      DoubleArrayList splitters)
        Splits (partitions) a list into sublists such that each sublist contains the elements with a given range. splitters=(a,b,c,...,y,z) defines the ranges [-inf,a), [a,b), [b,c), ..., [y,z), [z,inf].

        Examples:

          data = (1,2,3,4,5,8,8,8,10,11).
          splitters=(2,8) yields 3 bins: (1), (2,3,4,5) (8,8,8,10,11).
          splitters=() yields 1 bin: (1,2,3,4,5,8,8,8,10,11).
          splitters=(-5) yields 2 bins: (), (1,2,3,4,5,8,8,8,10,11).
          splitters=(100) yields 2 bins: (1,2,3,4,5,8,8,8,10,11), ().
        Parameters:
        sortedList - the list to be partitioned (must be sorted ascending).
        splitters - the points at which the list shall be partitioned (must be sorted ascending).
        Returns:
        the sublists (an array with length == splitters.size() + 1. Each sublist is returned sorted ascending.
      • standardDeviation

        public static double standardDeviation(double variance)
        Returns the standard deviation from a variance.
      • standardError

        public static double standardError(int size,                   double variance)
        Returns the standard error of a data sequence. That is Math.sqrt(variance/size).
        Parameters:
        size - the number of elements in the data sequence.
        variance - the variance of the data sequence.
      • standardize

        public static void standardize(DoubleArrayList data,               double mean,               double standardDeviation)
        Modifies a data sequence to be standardized. Changes each element data[i] as follows: data[i] = (data[i]-mean)/standardDeviation.
      • sum

        public static double sum(DoubleArrayList data)
        Returns the sum of a data sequence. That is Sum( data[i] ).
      • sumOfInversions

        public static double sumOfInversions(DoubleArrayList data,                     int from,                     int to)
        Returns the sum of inversions of a data sequence, which is Sum( 1.0 / data[i]).
        Parameters:
        data - the data sequence.
        from - the index of the first data element (inclusive).
        to - the index of the last data element (inclusive).
      • sumOfLogarithms

        public static double sumOfLogarithms(DoubleArrayList data,                     int from,                     int to)
        Returns the sum of logarithms of a data sequence, which is Sum( Log(data[i]).
        Parameters:
        data - the data sequence.
        from - the index of the first data element (inclusive).
        to - the index of the last data element (inclusive).
      • sumOfPowerDeviations

        public static double sumOfPowerDeviations(DoubleArrayList data,                          int k,                          double c)
        Returns Sum( (data[i]-c)k ); optimized for common parameters like c == 0.0 and/or k == -2 .. 4.
      • sumOfPowerDeviations

        public static double sumOfPowerDeviations(DoubleArrayList data,                          int k,                          double c,                          int from,                          int to)
        Returns Sum( (data[i]-c)k ) for all i = from .. to; optimized for common parameters like c == 0.0 and/or k == -2 .. 5.
      • sumOfPowers

        public static double sumOfPowers(DoubleArrayList data,                 int k)
        Returns the sum of powers of a data sequence, which is Sum ( data[i]k ).
      • sumOfSquaredDeviations

        public static double sumOfSquaredDeviations(int size,                            double variance)
        Returns the sum of squared mean deviation of of a data sequence. That is variance * (size-1) == Sum( (data[i] - mean)^2 ).
        Parameters:
        size - the number of elements of the data sequence.
        variance - the variance of the data sequence.
      • sumOfSquares

        public static double sumOfSquares(DoubleArrayList data)
        Returns the sum of squares of a data sequence. That is Sum ( data[i]*data[i] ).
      • trimmedMean

        public static double trimmedMean(DoubleArrayList sortedData,                 double mean,                 int left,                 int right)
        Returns the trimmed mean of a sorted data sequence.
        Parameters:
        sortedData - the data sequence; must be sorted ascending.
        mean - the mean of the (full) sorted data sequence.
      • variance

        public static double variance(double standardDeviation)
        Returns the variance from a standard deviation.
      • variance

        public static double variance(int size,              double sum,              double sumOfSquares)
        Returns the variance of a data sequence. That is (sumOfSquares - mean*sum) / size with mean = sum/size.
        Parameters:
        size - the number of elements of the data sequence.
        sum - == Sum( data[i] ).
        sumOfSquares - == Sum( data[i]*data[i] ).
      • weightedMean

        public static double weightedMean(DoubleArrayList data,                  DoubleArrayList weights)
        Returns the weighted mean of a data sequence. That is Sum (data[i] * weights[i]) / Sum ( weights[i] ).
      • weightedRMS

        public static double weightedRMS(double sumOfProducts,                 double sumOfSquaredProducts)
        Returns the weighted RMS (Root-Mean-Square) of a data sequence. That is Sum( data[i] * data[i] * weights[i]) / Sum( data[i] * weights[i] ), or in other words sumOfProducts / sumOfSquaredProducts.
        Parameters:
        sumOfProducts - == Sum( data[i] * weights[i] ).
        sumOfSquaredProducts - == Sum( data[i] * data[i] * weights[i] ).
      • winsorizedMean

        public static double winsorizedMean(DoubleArrayList sortedData,                    double mean,                    int left,                    int right)
        Returns the winsorized mean of a sorted data sequence.
        Parameters:
        sortedData - the data sequence; must be sorted ascending.
        mean - the mean of the (full) sorted data sequence.

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